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Webinar: Import and analyze public data from SRA, GEO and TCGA in Qlucore Omics Explorer

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The Medical Library provides free access to Qlucore Omics Explorer to Yale affiliates. Many new studies include RNA sequencing data. In this webinar we will go through the process of downloading and importing SRA data using the SRA toolkit, how to use an aligner to convert fastq files into BAM files and then how to import and normalize the BAM files in Omics Explorer. We will also show how you can download GEO soft files, TCGA mRNA data from GDAC and import 10X Genomics Cellranger data.

Date:
Thursday, April 29, 2021
Time:
10:00am - 10:30am
Time Zone:
Eastern Time - US & Canada (change)
Location:
Zoom Session -Medical (online only_2)
Campus:
Medical School
Categories:
  Bioinformatics  

Event Organizer

Profile photo of Rolando Garcia-Milian
Rolando Garcia-Milian