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Loupe Browser Software: Annotate, QC, & Reanalyze 10x Genomics Single-Cell GEX Data

Loupe Browser Software: Annotate, QC, & Reanalyze 10x Genomics Single-Cell GEX Data In-Person

Presenter: Nur-Taz Rahman, PhD. Applied Bioinformatics Scientist, 10x Genomics

Attendees to this event will learn how to visualize and analyze a 10x Genomics single-cell gene expression dataset for PBMCs using the Loupe Browser software. 
Learning goals:

1. Manually annotate cell types to identify rare cell type

2. Apply quality control thresholds on the dataset & generate new plots

3. Recluster the rare cell type to find cell subtypes 

Relevant files to use during the session will be sent to the registered attendees. They can follow using these files during the session, if desired. 
The session will not be recorded. 
After the session, important links will be sent to the attendees. 

Date:
Wednesday, September 18, 2024
Time:
1:00pm - 3:00pm
Time Zone:
Eastern Time - US & Canada (change)
Location:
Zoom Session -Medical (online only_1)
Campus:
Medical School
Categories:
  Bioinformatics  
Registration has closed.

Event Organizer

Profile photo of Rolando Garcia-Milian
Rolando Garcia-Milian