Online Training on TRANSFAC & PROTEOME and their application for promoter and functional analysis
TRANSFAC is the database of eukaryotic transcription factors (and miRNAs), their experimentally determined genomic binding sites and derived DNA-binding motifs (PWMs). TRANSFAC allows to search for transcription factor targets based on experimentally determined TF-binding sites, as well as to predict putative transcription factor binding sites in regulatory regions with the included tools (Match/FMatch/CMsearch).
The PROTEOME database includes HumanPSD, with focus on gene ontology data, expression patterns and, particularly, association of human (and mouse) genes with diseases and their potential use as biomarkers, as well as TRANSPATH on mammalian signal transduction and metabolic pathways, for functional and network analysis.
Integrated under one web interface, TRANSFAC and PROTEOME, allow seamless analysis with the included gene regulation and functional analysis tools.
- Tuesday, May 16, 2017
- 10:00am - 12:00pm
- SHM L Room 101A Yale Medical Library, 333 Cedar St. New Haven CT 06520
- Medical School